Research Topics
Publications within the group (14)
TasteBench: Multimodal Benchmark for Sensory Prediction, from Molecules to Sustainable Foods / NeurIPS / '26
Introduces TasteBench, a multimodal benchmark and competition for sensory prediction across 21K+ human evaluations on 215 plant-based foods and 15K flavor molecules, providing computational proxies to accelerate sustainable food discovery.
kinGEMs: A scalable framework for resource-constrained models through stochastic tuning of deep learning-predicted kinetic parameters / PLOS Comput Biol / '26
Couples deep learning turnover number predictions with stochastic simulated annealing to parameterize enzyme-constrained genome-scale models across 93 organisms, resolving long-standing biocatalytic data sparsity.
A semantic-based community model for high-fidelity tuning of olfactory mixture distances / PNAS / '26
Crowdsources predictive models across 26 international teams in the DREAM Olfactory Challenge, demonstrating that compact semantic representations of single odorants generalize to complex mixture perceptual spaces.
Artificial intelligence for food innovation / Nature Food / '26
Comprehensive review articulating an AI-driven framework for sustainable food formulation, spanning perception modeling, multi-omics fermentation engineering, and consumer acceptance.
Gradient-based optimization of complex nanoparticle heterostructures enabled by deep learning on heterogeneous graphs / Nature Computational Science / '26
Develops differentiable heterogeneous graph neural network surrogates for kinetic Monte Carlo simulations of core-shell upconverting nanoparticles, achieving 6.5-fold experimental emission enhancement via gradient ascent.
TubercuProbe: A cross-attention graph-sequence model for cross-species chemoproteomic discovery in Mycobacterium tuberculosis / bioRxiv / '26
Pairs a GINE molecular graph encoder with frozen ESM-C protein language model embeddings via cross-attention to predict covalent target engagement across pathogen proteomes with few-shot transfer.
CheMixHub: Datasets and benchmarks for chemical mixture property prediction / NeurIPS / '25
Establishes the first unified open-source benchmark suite spanning 11 diverse chemical mixture domains with standardized splitting protocols and deep learning baseline models.
Graph Data Modeling: Molecules, Proteins, & Chemical Processes / ACS In Focus / '25
A foundational pedagogical text and monograph introducing structural, geometric, and kinetic graph neural networks for molecules, macromolecular proteins, and complex biological pathways.
Does this smell the same? Learning representations of olfactory mixtures using inductive biases / Machine Learning: Science and Technology / '25
Introduces POMMix, incorporating inductive perceptual pooling operations on molecular graphs to predict the non-linear emergent sensory properties of multi-component odorant mixtures.
Ranking over regression for Bayesian optimization and molecule selection / APL Machine Learning / '25
Demonstrates that pairwise ranking surrogates systematically outperform point regression models in Bayesian optimization for molecular property design, mitigating miscalibration and heteroskedastic noise.
Deep learning-driven discovery of insect repellents / Chemical Senses / '25
Leverages graph neural representations from the Principal Odor Map (POM) to discover potent, novel repellent chemotypes validated experimentally against multiple mosquito disease vectors.
Advancing molecular machine learning representations with stereoelectronics-infused molecular graphs / Nature Machine Intelligence / '25
Introduces Stereoelectronics-Infused Molecular Graphs (SIMGs) and neural surrogate estimators that encode Natural Bond Orbital interactions into molecular graphs in seconds, boosting property prediction accuracy.
Delocalized, asynchronous, closed-loop discovery of organic laser emitters / Science / '24
A globally distributed, asynchronous self-driving laboratory discovers 21 state-of-the-art organic solid-state laser gain materials across multiple sites and automated robotics testbeds.
Perspective on AI for accelerated materials design at the AI4Mat-2023 workshop at NeurIPS 2023 / Digital Discovery / '24
Synthesizes key outcomes from the AI4Mat workshop at NeurIPS 2023, charting trajectories for self-driving laboratories, simulation-to-materials workflows, and language models for physical science.